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Is a Stipend Taxable? An Employer Guide

Are stipends taxable? Which are wages, which are tax-free, the accountable plan rules that change the answer, and what employers must report on the W-2.

Nick Anisimov

Nick Anisimov

FirstHR Founder

Payroll
18 min

Is a Stipend Taxable?

Which stipends are wages, which are tax-free, and the one rule that decides the difference

You decided to give people $150 a month toward their home office, or their gym, or their phone bill. It felt like a clean, generous thing to do. Then someone asked whether it is taxable, and the answer turns out to be that it depends on something you have probably not thought about: not what the money is for, but how you pay it.

That is the actual finding of this whole topic, and it is worth stating before anything else. The same $150, for the same purpose, to the same person, is fully taxable wages if you pay it as a flat allowance and completely tax-free if you pay it as a substantiated reimbursement. The IRS calls the second version an accountable plan, and the three conditions it has to meet are the most valuable thing on this page.

This guide covers why most stipends are taxable, the accountable plan rules in plain language, a type-by-type breakdown with the current dollar limits, what the tax actually costs, the health stipend trap that catches employers approaching 50 employees, what you report and withhold, state obligations, and policy language for each structure. Getting stipends coded correctly alongside everything else is the kind of thing I built FirstHR for. This is general information rather than tax advice, and the figures here are 2026 amounts that change annually.

TL;DR
Most stipends paid to employees are taxable wages, reported in Box 1 of the W-2 and subject to withholding and payroll tax on both sides. Two things make a stipend tax-free. An accountable plan, requiring a business connection, substantiation, and return of excess, converts an allowance into a tax-free reimbursement. Or a statutory exclusion with its own limit: educational assistance up to $5,250 per year, commuter benefits up to $340 per month in 2026. A health insurance stipend is always wages and does not satisfy the ACA employer mandate.

The Short Answer

Most stipends are taxable. A stipend paid to an employee is generally treated as wages, included in Box 1 of their W-2, and subject to income tax withholding and payroll taxes. The exceptions are payments made under an accountable plan with proper substantiation, and specific categories with statutory limits such as educational assistance and commuter benefits.

If you only take one thing further, take this: whether a stipend is taxable is usually a question about your process, not about the category of spending. Most employers who want a tax-free stipend can have one by changing how they pay it.

3
Conditions an accountable plan must meet, all of them, to make a payment tax-free
$5,250
Annual educational assistance an employer can exclude from wages per employee
$340
Monthly 2026 limit for transit and for qualified parking, each separately

Why Most Stipends Are Taxable

The default rule is broader than most employers realize and it does not have a stipend-shaped exception in it.

Definition
Stipend Taxability
A stipend is a fixed sum an employer pays an employee to help cover a category of expense, such as wellness, home office costs, or health premiums. Because a stipend is a form of pay for the performance of services, it is a fringe benefit, and per IRS Publication 15-B a fringe benefit is taxable and must be included in the recipient's pay unless the law specifically excludes it. Most stipend categories have no exclusion, so the payment is wages, reported on the W-2 and subject to withholding and employment taxes.

Note what that rule does not ask. It does not ask whether the money was spent on something worthy, whether the employee needed it, or whether you called it a reimbursement in the announcement email. It asks whether a specific exclusion applies. If none does, the payment is wages.

One consequence worth internalizing: labeling matters far less than employers expect. Calling a flat monthly payment a reimbursement does not make it one. What makes it a reimbursement is that it reimburses a documented expense, which is exactly what the accountable plan rules require. The wider taxable-unless-excluded framework across every kind of employer-provided perk sits in the fringe benefits guide.

The Rule That Changes the Answer

An accountable plan is the mechanism that converts taxable allowance money into tax-free reimbursement money. It is defined in Treasury Regulation 1.62-2 and explained in IRS Publication 463, and it comes down to three conditions.

Business connectionThe expense had to be incurred doing your work. A home office chair for someone who works from home qualifies. A television does not, however loosely you define wellbeing.Fails when: A flat monthly amount paid regardless of whether anything was spent.
SubstantiationThe employee has to document what they spent, when, and why, within a reasonable period. Sixty days is the IRS safe harbor for doing so.Fails when: Paying first and asking for receipts never, or accepting a claim with no detail behind it.
Return of excessIf you advanced more than was actually spent, the difference comes back. One hundred twenty days is the IRS safe harbor for returning it.Fails when: Letting the employee keep the unspent balance, which converts the whole arrangement to wages.
All three must be satisfied. Missing any one makes the arrangement non-accountable, which means every dollar is wages, subject to withholding and payroll tax on both sides.
The Two Safe Harbors Worth Writing Into Your Policy
The regulation asks for substantiation and return of excess within a reasonable period, which is vague until you use the safe harbors. Substantiating an expense within 60 days of when it was paid or incurred is deemed reasonable. Returning an unsubstantiated advance within 120 days is deemed reasonable. Put those two numbers in your policy and the reasonableness question stops being a judgment call. Most employers never do this, and then have an argument about timing with no rule to point at.

The practical consequence for a small business is that the choice between taxable and tax-free is mostly a choice about whether anyone will handle receipts. If someone will, you can run an accountable plan and deliver the full value. If nobody will, run an honest taxable stipend and price it accordingly, because an undocumented reimbursement program is not tax-free, it is a non-accountable plan you have not been withholding on.

That last scenario is a genuine liability rather than a technicality. Payments treated as tax-free that should have been wages mean under-withholding, and the exposure sits with the employer.

Stipend Types, One by One

Here is the breakdown employers actually want, with the current thresholds attached.

Taxable
Health insurance stipendCash toward premiums is wages. It also does not satisfy the ACA employer mandate for applicable large employers. An HRA is the tax-free instrument for this.
Taxable
Wellness or lifestyle stipendGym memberships, fitness apps, and general wellbeing spending have no exclusion. The IRS has said gym membership fees under a wellness program are included in income.
Depends
Remote work or home office stipendA flat monthly allowance is wages. The same money paid as a substantiated reimbursement under an accountable plan is tax-free. Identical dollars, different treatment.
Depends
Cell phone stipendA phone provided primarily for noncompensatory business reasons is generally nontaxable per IRS Notice 2011-72. A flat unsubstantiated cash stipend is wages.
Tax-free to a limit
Education or tuition assistanceUp to $5,250 per employee per year under a written Section 127 plan, excluded from Box 1 of the W-2. Anything above that is taxable.
Tax-free to a limit
Commuter benefitsUp to $340 per month for transit and vanpooling and $340 per month for qualified parking in 2026, under Section 132(f). Excess is taxable.
Usually taxable
Meal or food stipendA recurring cash allowance is wages. Occasional meals of minimal value can be de minimis, but a monthly stipend is neither occasional nor minimal.
Tax-free if substantiated
Business mileage reimbursementPaid at or below the IRS standard rate with a mileage log under an accountable plan. A flat car allowance with no log is wages.
Dollar limits are 2026 figures and change annually. Confirm the current amounts before relying on them, and treat this as general information rather than tax advice.

Two rows say depends, and those two are where nearly all the confusion in this topic lives. Remote work and cell phone stipends are the categories where identical amounts get taxed completely differently based on structure, which is why they generate more questions than everything else combined.

The wellness row is the one employers most often hope is wrong. It is not: general wellbeing spending has no exclusion, and the design consequences of that are worked through in the wellness stipend guide, including the separate risk of a wellness program drifting into medical expenses.

The mileage row is worth a note on freshness. The IRS business standard mileage rate changed mid-year in 2026, which is unusual: it was 72.5 cents per mile from January 1 and rose to 76 cents from July 1. If your policy hard-codes a rate, it went stale in July. The full comparison of flat allowance versus per-mile reimbursement sits in the vehicle stipend guide.

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The Dollar Limits Worth Knowing

Three exclusions have specific numbers attached, and knowing them is the difference between a benefit that is tax-free and one that is accidentally wages.

Exclusion2026 limitThe conditionWhat happens above the limit
Educational assistance (Section 127)$5,250 per employee per yearRequires a written educational assistance planThe excess is taxable wages in Box 1
Transit and vanpooling (Section 132(f))$340 per monthQualified transportation fringe benefitThe excess is included in wages
Qualified parking (Section 132(f))$340 per monthParking at or near the workplace or a commuting hubThe excess is included in wages
Health FSA salary reduction$3,400 for 2026 plan yearsCafeteria plan electionContributions above the limit are not permitted
De minimis benefitsNo fixed dollar figureMinimal value, provided infrequentlyCash and gift cards are never de minimis, at any amount

The educational assistance exclusion is the most under-used of these at small companies, and it recently got better. The $5,250 covers tuition, fees, books, and since 2025 also qualified student loan repayments on a permanent basis. The IRS has confirmed the figure applies for 2025 and 2026, with inflation indexing beginning for taxable years after 2026. It requires a written plan, which is a real requirement rather than a formality.

The de minimis row deserves emphasis because it is where wishful thinking concentrates. Cash and cash equivalents, including gift cards, are never excludable as de minimis benefits regardless of how small the amount. Paying a stipend as a gift card changes the accounting and nothing else.

What the Tax Actually Costs

The abstract version of this is a percentage nobody feels. Here it is on an ordinary stipend at an ordinary company.

What a taxable $200 monthly stipend really costs and delivers
A stipend paid outside an accountable plan is wages. It is withheld against on the employee side and carries payroll tax on yours, so the number you announced is not the number anyone receives.
Stipend as announced$200
Employee side: income tax and FICA at a combined 28%-$56
What the employee actually receives$144
Employer side: your FICA at 7.65%+$15.30
Your cost to deliver $144 of value$215.30
Roughly 33 cents of every dollar goes to tax rather than to the employee. Run the same $200 as a substantiated reimbursement under an accountable plan and the full amount lands, at a lower cost to you. Combined rate is illustrative and varies by state and income.

Two decisions follow from that arithmetic. If you are running a taxable stipend deliberately, gross it up: to deliver $150 of purchasing power you need to announce roughly $200. And if the same benefit could run through an accountable plan instead, the full amount reaches the employee and your cost is lower, which usually justifies the receipt review.

Whichever you pick, say it out loud at launch. Employees are entirely fine being told a benefit is taxable and reliably unhappy discovering it from a pay stub, and the difference between those two experiences costs one sentence in the announcement.

The Health Stipend Problem

Health insurance stipends deserve their own section because they carry a risk the other categories do not, and it lands on businesses at exactly the size where it is easiest to miss.

Cash toward premiums is taxable wages. That much is straightforward. The part that catches employers is that a stipend does not count as offering coverage under the Affordable Care Act employer mandate, which applies to applicable large employers, defined as those averaging at least 50 full-time employees including full-time equivalents in the prior calendar year.

The Threshold That Sneaks Up on a Growing Business
If you cross 50 full-time equivalents and are offering cash instead of coverage, the stipend does not protect you. For 2026 the penalties are $3,340 per year per full-time employee beyond the first 30 where no coverage is offered, and $5,010 per year for each employee who receives a marketplace subsidy because the coverage offered was unaffordable or inadequate. The IRS sets these annually. The employer shared responsibility rules are worth reading before you grow past the threshold rather than after.

Below 50 full-time equivalents the mandate does not apply, so a health stipend is a legitimate option for a small employer that cannot afford group coverage. It is simply an expensive one, because roughly a third of it goes to tax rather than to premiums.

The tax-efficient alternative is a health reimbursement arrangement, which reimburses medical expenses and premiums tax-free when properly structured. For a business under 50 people, a qualified small employer HRA is designed for exactly this situation and delivers considerably more value per dollar than cash.

What You Report and Withhold

The mechanics are simpler than the rules, and they need setting up once rather than deciding each cycle.

Taxable stipendAccountable plan reimbursement
Payroll setupRecurring taxable earning codeNon-taxable reimbursement code
W-2 Box 1Included in wagesNot included
Income tax withholdingYesNo
Social Security and MedicareYes, both sidesNo
Employer FICA cost7.65% on top of the stipendNone
Documentation neededNone required for tax purposesItemized receipts, retained
What the employee receivesRoughly two thirds of the amountThe full amount

Read the last two rows together and the trade is clear: the accountable plan costs you receipt handling and gives back roughly a third of the value. At small volumes that is a very good exchange, and it gets less attractive as the number of claims grows.

One setup note that prevents most of the pain here. Whichever route you choose, agree the earning code with whoever runs payroll before the first payment. A stipend paid untaxed that should have been withheld against requires a correction, and corrections in payroll are always more work than they sound. The broader mechanics sit in the payroll deductions guide.

Which Structure to Use

Stripped of the tax vocabulary, this is a choice between simplicity and value, and the right answer depends on facts you already know.

Pros
Accountable plan: the employee receives the full amount rather than about two thirds
Accountable plan: no employer payroll tax on the reimbursed amounts
Accountable plan: you pay only for what is actually claimed, so unclaimed budget stays with you
Taxable stipend: nothing to review, nothing to chase, one line in payroll
Taxable stipend: predictable cost and predictable payment, both sides know the number
Cons
Accountable plan: someone reviews receipts every month, without exception
Accountable plan: a lapse in documentation retroactively makes the whole arrangement non-accountable
Taxable stipend: roughly a third of every dollar goes to tax rather than the employee
Taxable stipend: you pay the full amount whether or not anyone spends it
Either: a policy that describes one structure while you run the other is the worst outcome

My default recommendation for a business with five to fifty people: use an accountable plan where the expense is genuinely business-connected, such as home office equipment or business mileage, and use an honest taxable stipend where it is not, such as a gym membership or general wellbeing. That split follows the law rather than fighting it, and it keeps the receipt burden on the category where the value of avoiding tax is highest.

What worked for me
The mistake I made was describing our home office allowance as a reimbursement in the announcement while running it as a flat monthly payment with no receipts. Nobody was being clever; I just used the word that felt natural. The result was that people reasonably assumed it was tax-free, and then saw withholding on it. The conversation that followed was not about money, it was about feeling misled, which is a much worse conversation. What I do now is decide the structure first and then write the announcement from the structure, rather than describing the intention and letting the mechanics follow. If it is a flat amount with no receipts, the announcement says taxable allowance. Two words, and it removes the entire problem.

The State Law Layer

Federal tax treatment is only half the picture. Several states require employers to reimburse necessary business expenses, and that obligation exists independently of whether you offer a stipend.

California is the strictest and best known, requiring employers to indemnify employees for all necessary expenditures incurred in the discharge of their duties. Illinois and Massachusetts impose comparable duties, and other states have broad indemnification statutes with varying scope. The rule that applies is the one where the employee works, not where the company is registered, which matters for any distributed team.

The practical implication is that a flat stipend may not discharge the obligation if an employee's actual necessary expenses exceed it. The fix is simple: keep the stipend, and add a clause allowing employees to submit documented expenses above the allowance for reimbursement. That preserves the simplicity for the ordinary case and closes the gap for the outlier.

Policy Language for Each Structure

Four clauses, and the important instruction is to use the first or the second rather than both for the same benefit.

Policy language for each structure
Non-accountable stipend, paid as wages
The Company provides a monthly [wellness / remote work] allowance of $[amount] to eligible employees. This allowance is paid through regular payroll, is treated as taxable wages, is reported on the employee's Form W-2, and is subject to income tax withholding and payroll taxes. Receipts are not required and unspent amounts are not returned.
Accountable plan reimbursement, paid tax-free
The Company will reimburse eligible business expenses up to $[amount] per month. To be reimbursed, an employee must submit an itemized receipt showing the amount, date, and business purpose within [60] days of the expense. Reimbursements made under this policy are not treated as wages and are not reported as taxable income.
Return of excess (accountable plans only)
Where the Company advances funds before an expense is incurred, the employee must return any portion not substantiated by an itemized receipt within [120] days of the advance. Amounts not substantiated or returned within that period will be treated as taxable wages and reported accordingly.
State reimbursement obligations
Where state law requires reimbursement of necessary business expenses, employees may submit documented expenses that exceed any allowance provided, and the Company will reimburse the difference in accordance with applicable law.
Use the first clause or the second, not both for the same benefit. Mixing the language is how employers end up describing an accountable plan while running a non-accountable one. This is an illustrative starting point rather than tax advice.

The reason mixing them is dangerous is exactly the mistake described above. A policy that promises tax-free reimbursement while the payroll process runs a flat taxable allowance creates a written expectation you are not meeting, and in a dispute the written document is what people rely on.

Setting It Up Correctly

For a business with five to fifty people, this is the whole implementation.

1
Decide the structure before the amount
Accountable plan or taxable allowance. Every other decision follows from this one, and deciding it after you have announced a number is how the mismatches happen.
2
Check whether an exclusion already covers it
Educational assistance, commuter benefits, and business mileage all have designed routes that beat a taxable stipend. Use them where they fit rather than paying tax unnecessarily.
3
Write the substantiation rules if accountable
Itemized receipt with amount, date, and business purpose, submitted within 60 days, with any advance excess returned within 120 days. Both numbers in the policy.
4
Gross up if taxable
Divide the value you want delivered by roughly 0.7. To put $150 in someone's pocket you announce about $200, and you should know that going in.
5
Set the payroll code before the first payment
Taxable earning code or non-taxable reimbursement code, agreed in advance. Corrections cost far more than configuration.
6
Say the tax treatment in the announcement
One sentence. Employees are fine being told and unhappy discovering it themselves, and the difference is entirely in your control.
7
Add a state reimbursement clause
If you have employees in California, Illinois, Massachusetts, or another indemnification state, allow documented expenses above the allowance to be submitted.
8
Diarize an annual review
The Section 127 limit begins indexing after 2026, commuter limits move each year, and the mileage rate changed mid-2026. A policy with hard-coded figures goes stale quietly.
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If You Received a Stipend

Short section for the other side of this question, since it is asked almost as often.

If you are a W-2 employee and your employer pays you a stipend as a flat amount, it is almost certainly taxable and should already be included in Box 1 of your W-2 with tax withheld. You do not need to do anything separately; it has been handled through payroll. If it is not showing on your W-2 and no tax was withheld, that is worth asking about, because it may indicate the employer treated it as an accountable plan reimbursement.

If you are not an employee, as with some interns, fellows, or grant recipients, the picture differs. Payments may come with no withholding at all, which leaves you responsible for reporting the income and potentially for making estimated tax payments during the year. The absence of withholding is not the same as the absence of tax, and that gap is where people get an unwelcome surprise at filing time. This is a good situation for actual tax advice rather than a general guide.

Where Employers Get This Wrong

Six patterns, and the first is the one with real financial exposure attached.

The Recurring Failures
Treating a flat allowance as a tax-free reimbursement without substantiation, which means under-withholding and a liability sitting quietly on your books. Announcing an amount without saying it is taxable. Paying a health stipend at or above 50 full-time equivalents and assuming it satisfies the ACA mandate. Using gift cards in the belief that small amounts are de minimis, which they never are. Ignoring the statutory exclusions and paying tax on educational assistance or commuter costs that could have been tax-free. And letting the policy language and the payroll setup describe two different structures.

If you fix one thing, audit the first. Any payment you currently treat as a tax-free reimbursement should have receipts behind it. If it does not, you are running a non-accountable plan and the amounts should have been wages, and the sooner that is corrected the smaller the problem is.

Key Takeaways
Most stipends paid to employees are taxable wages, included in Box 1 of the W-2 and subject to withholding and payroll tax on both sides.
The governing rule is that a fringe benefit is taxable unless the law specifically excludes it. Most stipend categories have no exclusion.
An accountable plan makes the same payment tax-free. It requires all three of business connection, substantiation, and return of excess.
The IRS safe harbors are 60 days to substantiate an expense and 120 days to return an unsubstantiated advance. Put both numbers in your policy.
Educational assistance is excludable up to $5,250 per employee per year under a written Section 127 plan, and now permanently covers student loan repayment.
Commuter benefits are excludable up to $340 per month for transit and $340 per month for parking in 2026, separately.
Health insurance stipends are always wages and do not satisfy the ACA employer mandate. For 2026 the penalties are $3,340 and $5,010 per employee.
Cash and gift cards are never de minimis, at any amount. Paying a stipend by gift card changes nothing about the tax.
A taxable $200 stipend delivers about $144 and costs you about $215. Gross up if you want a specific amount to actually arrive.
Describing a reimbursement in the policy while running a flat allowance in payroll is the single most common and most damaging mismatch.

Frequently Asked Questions

Is a stipend taxable?

Usually yes. Most stipends paid to employees are taxable wages, reported in Box 1 of the W-2 and subject to income tax withholding and payroll taxes on both sides. The IRS treats fringe benefits as taxable unless a specific exclusion applies, and general allowances for wellness, health costs, or home office setup have no exclusion. The main exceptions are payments made under an accountable plan with proper substantiation, and specific categories with statutory limits such as educational assistance and commuter benefits.

What makes a stipend tax-free?

Two routes. The first is an accountable plan, which requires all three of a business connection, substantiation of the expense within a reasonable period, and return of any excess advance. Meet all three and the reimbursement is excluded from wages entirely. The second route is a specific statutory exclusion with its own limit, such as educational assistance up to $5,250 per year under Section 127 or qualified transportation benefits up to $340 per month in 2026. Outside those two routes, a stipend is wages.

Are remote work stipends taxable?

It depends entirely on how you pay it. A flat monthly allowance for home office costs, paid regardless of what anyone actually spent, is a non-accountable plan and is taxable wages. The same money paid as reimbursement against itemized receipts under an accountable plan is tax-free to the employee and carries no payroll tax for you. This is the single most confused category, because the amount and the purpose can be identical while the tax treatment is completely different.

Is a health insurance stipend taxable?

Yes. Cash paid to employees toward health insurance premiums is taxable wages, subject to income tax withholding and payroll taxes. It also does not satisfy the Affordable Care Act employer mandate, so an applicable large employer with 50 or more full-time equivalents cannot substitute a stipend for offering coverage. For 2026 the penalties for failing to offer coverage are $3,340 per year per full-time employee beyond the first 30, and $5,010 per employee receiving a marketplace subsidy. A health reimbursement arrangement is the tax-free alternative.

Do employers have to withhold taxes on stipends?

For stipends paid to W-2 employees that are not excluded from wages, yes. The stipend runs through payroll as taxable compensation, appears in Box 1 of the W-2, and is subject to federal income tax withholding, Social Security, and Medicare, with the employer paying its matching FICA share of 7.65 percent. Set it up as a recurring taxable earning code rather than paying it ad hoc, because correcting a payment that went out untaxed is considerably more work than configuring it right the first time.

Is a stipend considered earned income?

For an employee, generally yes. A stipend paid to a W-2 employee as compensation for services is earned income and appears in Box 1 of the W-2 alongside their salary. For non-employees such as some interns, fellows, or research grant recipients, the treatment varies with the facts, and the payment may be reported differently or not withheld against at all, leaving the recipient responsible for self-reporting and potentially for estimated tax payments. The classification of the recipient matters as much as the label on the payment.

Is an education or tuition stipend taxable?

Not up to a limit. Under a written Section 127 educational assistance program, an employer may exclude up to $5,250 per employee per calendar year from wages, and those benefits should not appear in Box 1 of the W-2. The exclusion covers tuition, fees, books, and, permanently since 2025, qualified student loan repayments. Amounts above $5,250 in a year are taxable. The IRS has confirmed the $5,250 figure applies for 2025 and 2026, with inflation indexing for taxable years after 2026.

Are cell phone stipends taxable?

It depends on the structure. Per IRS Notice 2011-72, where an employer provides a cell phone primarily for noncompensatory business reasons, the business and personal use is generally nontaxable to the employee, and the IRS does not require recordkeeping of business use in that case. A flat cash stipend paid without any connection to an actual business phone requirement is treated differently and is generally taxable wages. The distinction is whether there is a genuine business reason documented behind the arrangement.

How do you report a stipend on a W-2?

A taxable stipend paid to an employee is included in Box 1 as wages, tips, and other compensation, and flows into Boxes 3 and 5 for Social Security and Medicare wages. It is not a separate box or a special code. Amounts excluded under an accountable plan or a statutory exclusion are simply not included in Box 1 at all. Educational assistance up to $5,250 is a specific example the IRS calls out: those benefits should not appear in Box 1.

Can you turn a taxable stipend into a tax-free one?

Often yes, by converting it from an allowance into a reimbursement under an accountable plan. Instead of paying a fixed $150 a month regardless of spending, reimburse documented expenses up to $150 against itemized receipts submitted within a reasonable period, with any advance excess returned. The employee gets the full amount instead of roughly two thirds of it, and you avoid the employer payroll tax. The cost is that someone has to review receipts, which is the trade at the heart of this entire topic.

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